Olá, saludos desde Brazil!

Note that PyMOL currently uses Qt instead of TKinter. Pretty formatted source code!

This pull request doesn't seem to follow the structure of Pymol-script-repo.

Plugins with GUI (tkinter) should be placed in the plugins folder and provide a __init_plugin__(app) or __init__(app) function.

Also, .gitattributes and .gitignore look good, but they need to be converted to LF line ending (maybe add them to .gitattributes with text eol=lf?).

• .gitattributes Convert to text eol=lf
• .gitignore Convert to text eol=lf
• PPIIMoL.py Duplicate of modules/ppiimol/PPIIMoL.py. Remove this one or move it to plugins folder.
• modules/README.md Remove? This is a spanish description of the entire repository, not the modules folder
• modules/__init__.py Remove, because modules should not be a module itself
• modules/ppiimol/PPIIMoL.py Duplicate of the other PPIIMoL.py file, only keep one
• modules/ppiimol/README.md This describes the original repo but doesn't reflect the layout in this pull request

Thank you for reviewing this pull request!
Please let me know if any adjustments are needed to meet the repository standards.
I’ll be happy to make the required changes.

Please, may you structure your README and code in a single .py file? The README can go into the module docstring.

The docstring is better in English because most users here probably can't read Spanish.

Thanks a lot, Pslacerda y speleo3, I'll get on it!!!

Please transform your 8 files into a single 1.